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View Structure Prediction Details

Protein: Y3866_ARATH
Organism: Arabidopsis thaliana
Length: 582 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y3866_ARATH.

Description E-value Query
Range
Subject
Range
gi|50881433 - gi|50881433|gb|AAT85278.1| NPH3 family protein [Oryza sativa (japonica cultivar-group)]
gi|125545026 - gi|125545026|gb|EAY91165.1| hypothetical protein OsI_012398 [Oryza sativa (indica cultivar-group)]
413.0 [0..4] [582..27]
gi|241941352, gi... - gi|242080467|ref|XP_002445002.1| hypothetical protein SORBIDRAFT_07g002590 [Sorghum bicolor], gi|241...
389.0 [0..23] [575..15]
gi|102139797 - gi|102139797|gb|ABF69982.1| nonphototropic hypocotyl 3 (NPH3) family protein [Musa acuminata]
383.0 [0..26] [576..63]
gi|25336228, gi|... - gi|6634762|gb|AAF19742.1|AC009917_1 Contains a bZIP transcription factor PF|00170 domain. ESTs gb|R...
378.0 [0..24] [575..13]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSDSTLSLP SSSPPCNNRS SVPPTFTTRI FSDVAGDIIV VVDGESFLLH KFPLVARSGK  60
   61 MRKMVRDLKD SSSMIELRDF PGGPSTFELT MKFCYGINFD ITAFNVVSLR CAAGYLEMTE 120
  121 DYKEQNLIFR AENYLDQIVF RSFHESVLVL CSCETQEIAE TYEIPDRCVE AIAMNACRKQ 180
  181 LV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 2nn2A
Description: No description for 2nn2A was found.

Predicted Domain #2
Region A:
Residues: [183-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGLSEELKGR DCLEMWTEEL SALGIDYYVQ VVSAMARLSV RSESIVASLV HYAKTSLKGI  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [243-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDRNCQEQRK IVEAMVNLLP NDEKGSYSLS IIPLGFLFGM LKVGTIIDIE ISCRLELERR  60
   61 IGHQLETASL DDLLIPSVQN EDSMYDVDTV HRILTFFLER IEEEDDECGY DSDSTGQHSS 120
  121 LLKVGRIMDA YLVEIAPDPY LSLHKFTAII ETLPEHSRIV DDGIYRAIDM YLKAHPLLTE 180
  181 EERKKLCNFI DCKKLSQEAS NHVAQNDRLP VQMVVRVLYT EQLRLKKALS GDSEEGSWVL 240
  241 PSGVQSR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.154902
Match: 1u6dX
Description: Crystal structure of the Kelch domain of human Keap1
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [490-582]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVSPRDTYAA LRRENRELKL EISRMRVRVS ELEKEHNLMK HEMMEKSGNN GGTFLTSLSK  60
   61 GIGRIATFGG ETRQKVNRKS RSVSERKSSR SGR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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