YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|67633846, gi|...
Organism: Arabidopsis thaliana
Length: 130 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|67633846, gi|....

Description E-value Query
Range
Subject
Range
gi|5821298 - gi|5821298|dbj|BAA83906.1| SRK13-b [Brassica oleracea]
234.0 [0..1] [129..73]

Back

Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWYRKLPNEV VWVANRDTPV SKPIGTLKIL NNNLHLIDHT SNSVWSTQVT SQSLKSELTA  60
   61 ELLDNGNLVL RYSNNNETSG FLWQSFGFPT DTLLHDMKVG WDKKSGLNRI LQSWKNRNDP 120
  121 STGDYTYSKT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.154902
Match: 1kj1D
Description: Lectin (agglutinin)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle