| Protein: | HDT2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 306 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HDT2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
159.0 | [0..15] | [298..4474] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MEFWGVAVTP KNATKVTPEE DSLVHISQAS LDCTVKSGES VVLSVTVGGA KLVIGTLSQD 60
61 KFPQISFDLV FDKEFELSHS GTKANVHFIG YKSPNIEQDD FTS
|
| Detection Method: |  |
| Confidence: | 1.27 |
| Match: | 1nlqA |
| Description: | Chromatin decondensation protein 1 (Crp1, Nlp) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [104-179] |
1 11 21 31 41 51
| | | | | |
1 SDDEDVPEAV PAPAPTAVTA NGNAGAAVVK ADTKPKAKPA EVKPAEEKPE SDEEDESDDE 60
61 DESEEDDDSE KGMDVD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [180-306] |
1 11 21 31 41 51
| | | | | |
1 EDDSDDDEEE DSEDEEEEET PKKPEPINKK RPNESVSKTP VSGKKAKPAA APASTPQKTE 60
61 EKKKGGHTAT PHPAKKGGKS PVNANQSPKS GGQSSGGNNN KKPFNSGKQF GGSNNKGSNK 120
121 GKGKGRA
|
| Detection Method: | |
| Confidence: | 1.04 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
