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View Structure Prediction Details

Protein: gi|21618248, gi|...
Organism: Arabidopsis thaliana
Length: 274 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21618248, gi|....

Description E-value Query
Range
Subject
Range
Y5986_ARATH - Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1
223.0 [0..5] [273..101]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT  60
   61 PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG KSLLPE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [107-274]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRISPFSSLN NSVIRLPGTE DRIVVYFTSL RGIRRTYEDC YAVRMIFRGF RVWIDERDVS  60
   61 MDIAYRKELQ IAMGEKSVSL PQVFIMGKYV GGADVIKSLF EIGELAKILK EFPMRQPGFV 120
  121 CHCCGDIRFV PCSNCSGSKK LFDEDEDRVK RCPECNENGL IRCPDCSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 1ykaA
Description: Solution structure of Grx4, a monothiol glutaredoxin from E. coli.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle