YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|15218824, gi|...
Organism: Arabidopsis thaliana
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15218824, gi|....

Description E-value Query
Range
Subject
Range
gi|25366911, gi|... - gi|7270204|emb|CAB77819.1| putative glycosylation enzyme [Arabidopsis thaliana], gi|4262162|gb|AAD14...
478.0 [0..1] [447..1]

Back

Predicted Domain #1
Region A:
Residues: [1-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKLYRKLVS FRDPFARVKR HVSSHSGFRA FSDRKWLFPF LASLIMSITL LILLISGQFD  60
   61 NFFGEEDQLP VDVVSESNDY FVESDFKQSM NSTADVNPEP PRLAYLISGT KGDSHRMMRT 120
  121 LQAVYHPRNQ YVLHLDLEAP PRERMELAMS VKTDPTFREM ENVRVMAQSN LVTYKGPTMI 180
  181 ACTLQAVSIL LRESLHWDWF LNLSASDYPL VTQDDLLYVF SNLSRNVNFI ENMQLTGWKL 240
  241 NQRAKSIIVD PALYLSKKSD IAWTTQRRSL PNSFRLFTGS AWIMLTRSFL EYCIWGWDNF 300
  301 PRTILMYYTN FVSSPEGYFH TVICNSKEFI NTAIGHDLHY IAWDSPPKQH PRSLSLKDFD 360
  361 NMVKSKAPFA RKFHKNDPAL DKIDKELLGR THRFAPGGWC VGSSANGNDQ CSVQGDDSVL 420
  421 KPGPGSERLQ ELVQTLSSEE FRRKQCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.045757
Match: 2gakA
Description: No description for 2gakA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle