YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|21592702, gi|...
Organism: Arabidopsis thaliana
Length: 498 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21592702, gi|....

Description E-value Query
Range
Subject
Range
gi|22296820 - gi|22296820|gb|AAM94349.1| pyruvate kinase [Glycine max]
592.0 [0..6] [498..18]

Back

Predicted Domain #1
Region A:
Residues: [1-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMIEQRPKT KIVCTLGPAS RSVPMVEKLL RAGMNVARFN FSHGSHEYHQ ETLDNLHQAM  60
   61 LNTGILCAVM LDTKGPEIRT GFLKDGKPIQ LKQGQEITIS TDYDLKGDEN TICMSYKKLA 120
  121 VDVNPGMVIL CADGTISLLV LSCDKENGTV RCRCENSAML GERKNVNLPG VVVDLPTLTE 180
  181 KDKEDIMQWG VPNQIDMIAL SFVRKGSDLV QVRKLLGKHA KNILLMSKVE NQEGVANFDD 240
  241 ILVNSDAFMI ARGDLGMEIP IEKIFLAQKV MIYKCNIQGK PVVTATQMLE SMIKSPRPTR 300
  301 AEATDVANAV LDGTDCVMLS GETAAGAYPE LAVRTMAKIC VEAESTLDYG DVFKRIMLYS 360
  361 PVPMSPLESL ASSAVRTANS ARATLIMVLT RGGSTARLVA KYRPGMPILS VVVPEIKTDF 420
  421 FDWSCSDESP ARHSLIFRGL IPVLYAGSAR ASHDESTEEA IEFATQYGKE KELCKTGDSV 480
  481 VALLRVGNAS VIKILTVK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 165.0
Match: 1zjhA
Description: Structure of human muscle pyruvate kinase (PKM2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle