| Protein: | NCED9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 657 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCED9_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
667.0 | [0..53] | [655..1] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MTIITIISGM YIYSLLSQDA HHSQYGQNTN LVLKKPIPKP QTAAFNQEST MASTTLLPST 60
61 STQFLDRTFS TSSSSSRPKL QSLSFSSTLR NKKLVVPCYV SSSVNKKSSV SSSLQSPTFK 120
121 PPSWKKLCND VTNLIPKTTN QNPKLNPVQR TAAMVLDAVE NAMI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [165-657] |
1 11 21 31 41 51
| | | | | |
1 SHERRRHPHP KTADPAVQIA GNFFPVPEKP VVHNLPVTGT VPECIQGVYV RNGANPLHKP 60
61 VSGHHLFDGD GMVHAVRFDN GSVSYACRFT ETNRLVQERE CGRPVFPKAI GELHGHLGIA 120
121 KLMLFNTRGL FGLVDPTGGL GVANAGLVYF NGHLLAMSED DLPYHVKVTQ TGDLETSGRY 180
181 DFDGQLKSTM IAHPKIDPET RELFALSYDV VSKPYLKYFR FTSDGEKSPD VEIPLDQPTM 240
241 IHDFAITENF VVIPDQQVVF RLPEMIRGGS PVVYDEKKKS RFGILNKNAK DASSIQWIEV 300
301 PDCFCFHLWN SWEEPETDEV VVIGSCMTPP DSIFNEHDET LQSVLSEIRL NLKTGESTRR 360
361 PVISEQVNLE AGMVNRNLLG RKTRYAYLAL TEPWPKVSGF AKVDLSTGEI RKYIYGEGKY 420
421 GGEPLFLPSG DGEEDGGYIM VFVHDEEKVK SELQLINAVN MKLEATVTLP SRVPYGFHGT 480
481 FISKEDLSKQ ALC
|
| Detection Method: | |
| Confidence: | 117.0 |
| Match: | 2biwA |
| Description: | Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme |
Matching Structure (courtesy of the PDB): |
|
