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View Structure Prediction Details

Protein: gi|9758221, gi|1...
Organism: Arabidopsis thaliana
Length: 428 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9758221, gi|1....

Description E-value Query
Range
Subject
Range
HST_TOBAC - Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HST PE=1 SV=1
297.0 [0..1] [412..1]

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Predicted Domain #1
Region A:
Residues: [1-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLELLSKEV IKPASPNHLQ TLSLSLFDQF LPSTYVSAIF FYDDHSNQED IQRLKSSLSQ  60
   61 TLSLFYPLAG QIKDGVTVHC NDEGALFTEA RAEIFLSDFL RNPSDADLIQ KFIVSPDHAD 120
  121 PETWPLLHVK VIFFKDKGFA VAVSVSHKIC DAASLSTFVC SWTKASKGYA DTVDPEFVGA 180
  181 DFYPPADISI EFPPLLVHET KSKTKRFVFG SLMIEKLKNR ASSGKRVPQA TRIESITALL 240
  241 LRCMTKAGHS KSGKVKEFAI TQTMDLRPRV SSSLLPHKAI GNFFFLPLLK ESSESKMEIE 300
  301 ETVSKLQKTK QELNELIRND SEDAKSSVEA KERIASAMLS SLCEISPEME TYAVSSWCRM 360
  361 SFYEANFGWG KPVWVAPDSV DKTQVVLMDS KDSEGVEARV TLPETDMAKY EHDSELLVYA 420
  421 TPSPSILI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.522879
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle