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View Structure Prediction Details

Protein: PEX14_ARATH
Organism: Arabidopsis thaliana
Length: 507 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX14_ARATH.

Description E-value Query
Range
Subject
Range
gi|11094252 - gi|11094252|dbj|BAB17667.1| PEX14 [Arabidopsis thaliana]
221.0 [0..1] [507..1]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATHQQTQPP SDFPALADEN SQIPEATKPA NEVQQATIAQ DPPTSVFKNS EPIREDQIQN  60
   61 AIKFLSHPRV RGSPVIHRRS FLERKGLTKE EIDEAFRRVP DPPPSSQTTV TTSQDGQQAV 120
  121 STVQPQAMQP VVAAPAPLIV TPQAAFLSRF RWYHAILAVG VLAASGAGTA VFIKRSLIPR 180
  181 F

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 6.69897
Match: PF04695.4
Description: No description for PF04695.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [182-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSWVQRIMLE EETDPLKKAD AKPSLAEEAV AAAKAASAAA SDVARVSQEM MITKNEERKY  60
   61 FEDLTHLLGV QVQEMKSLSN NIRKLEGQSN NIPKIYSADQ EVYNGSVTTA RKPYTNGSNV 120
  121 DYDTRSARSA SPPAAPADSS APPHPKSYMD IMSMIQRGEK PSNIREINDM PPNPNQPLSD 180
  181 PRIAPKSKPW DYGQAPQDES SNGQWWQQKN PRSTDFGYET TTAARFTANQ NETSTMEPAA 240
  241 FQRQRSWVPP QPPPVAMAEA VEAIRRPKPQ AKIDQEAAAS DGQSGVSDEL QKITKFSESG 300
  301 GDGSGGIKIA EIQEETEQQH ISQEGN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.14
Match: 1deqA
Description: Fibrinogen
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle