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View Structure Prediction Details

Protein: WAK4_ARATH
Organism: Arabidopsis thaliana
Length: 738 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WAK4_ARATH.

Description E-value Query
Range
Subject
Range
gi|3355308 - gi|3355308|emb|CAA08793.1| wall-associated kinase 4 [Arabidopsis thaliana]
573.0 [0..1] [738..1]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVQRLFLVA IFCLSYMQLV KGQTLPRCPE KCGNVTLEYP FGFSPGCWRA EDPSFNLSCV  60
   61 NENLFYKGLE VVEISHSSQL RVLYPASYIC YNSKGKFAKG TYYWSNLGNL TLSGNNTITA 120
  121 LGCNSYAFVS SNGTRRNSVG CISA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [145-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CDALSHEANG ECNGEGCCQN PVPAGNNWLI VRSYRFDNDT SVQPISEGQC IYAFLVENGK  60
   61 FKYNASDKYS YLQNRNVGFP VVLDWSIRGE TCGQVGEKKC GVNGICSNSA SGIGYTCKCK 120
  121 GGFQGNPYLQ NGCQDINECT TANPIHKHNC SGDSTCENKL GHFRCNCRSR YELNTTTNTC 180
  181 KPKGNPEYVE WTTIVLGTTI GFLVILLAIS CIE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.82
Match: 1nfuB
Description: Factor X, N-terminal module
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein binding 1.70750213771998 bayes_pls_golite062009
binding 1.38789395040223 bayes_pls_golite062009
protein kinase activity 1.38275946573629 bayes_pls_golite062009
receptor binding 1.24422754645921 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.20762085688195 bayes_pls_golite062009
kinase activity 1.11883509981719 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.980541441731055 bayes_pls_golite062009
transferase activity 0.625297688015921 bayes_pls_golite062009
growth factor activity 0.0895945489113192 bayes_pls_golite062009
catalytic activity 0.0197550253779933 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [358-738]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HKMKNTKDTE LRQQFFEQNG GGMLMQRLSG AGPSNVDVKI FTEEGMKEAT DGYDENRILG  60
   61 QGGQGTVYKG ILPDNSIVAI KKARLGDNSQ VEQFINEVLV LSQINHRNVV KLLGCCLETE 120
  121 VPLLVYEFIS SGTLFDHLHG SMFDSSLTWE HRLRMAVEIA GTLAYLHSSA SIPIIHRDIK 180
  181 TANILLDENL TAKVADFGAS RLIPMDKEDL ATMVQGTLGY LDPEYYNTGL LNEKSDVYSF 240
  241 GVVLMELLSG QKALCFERPQ TSKHIVSYFA SATKENRLHE IIDGQVMNEN NQREIQKAAR 300
  301 IAVECTRLTG EERPGMKEVA AELEALRVTK TKHKWSDEYP EQEDTEHLVG VQKLSAQGET 360
  361 SSSIGYDSIR NVAILDIEAG R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.0
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle