| Protein: | EF106_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 207 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EF106_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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232.0 | [0..1] | [207..68] |
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228.0 | [0..1] | [207..1] |
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224.0 | [0..1] | [207..1] |
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219.0 | [0..1] | [207..1] |
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208.0 | [0..1] | [207..1] |
|
|
207.0 | [0..1] | [194..1] |
|
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200.0 | [0..1] | [194..1] |
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171.0 | [0..1] | [177..4] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MASFEESSDL EAIQSHLLED LLVCDGFMGD FDFDASFVSG LWCIEPHVPK QEPDSPVLDP 60
61 DSFVNEFLQV EGESSSSSSP E
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.656 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.629 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.629 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.531 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.486 | a.276.1 | Description not found. |
| View | Download | 0.475 | a.60.8 | HRDC-like |
| View | Download | 0.466 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.412 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.392 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.382 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.251 | a.126.1 | Serum albumin-like |
|
Region A: Residues: [82-207] |
1 11 21 31 41 51
| | | | | |
1 LNSSSSTYET DQSVKKAERF EEEVDARHYR GVRRRPWGKF AAEIRDPAKK GSRIWLGTFE 60
61 SDVDAARAYD CAAFKLRGRK AVLNFPLDAG KYEAPANSGR KRKRSDVHEE LQRTQSNSSS 120
121 SSCDAF
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| Detection Method: | |
| Confidence: | 24.69897 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
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