| Protein: | gi|7487019, gi|3... |
| Organism: | Arabidopsis thaliana |
| Length: | 652 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7487019, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
|
484.0 | [0..1] | [622..1] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MDSEGVLMPL IHKHRMMPWN DLRRGDCCGR FESICDGYYC KICDIFVHKK CGESSEYIEH 60
61 PSHPNHTLQL LSTRGNSHDC DLCGKNIGDL FYRCEICDFD MDLYCAKYPP PEVINISKT
|
| Detection Method: |  |
| Confidence: | 2.18 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [120-347] |
1 11 21 31 41 51
| | | | | |
1 HHHKLNLLKE LIQFDYCVWH PPEVNHTLEV NHSYHSLHPL KLHTGQLPNY SDRKCRLCAK 60
61 EIEVGLFYHC SLCNFTLDMS CVLNPPQRYL WNLKAHDHQL TLLPSLRSFL CSACGLNGDR 120
121 SPYICVQCDF MIHQVCLHLP RVININRHDH RVSRTSVLGV VNSVCGVCRQ KVDWTCGGFS 180
181 CPRCPGYAAH SLCATREDVW NGKELEGVPE EIEDIEPYVV IDDNTIQH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [348-462] |
1 11 21 31 41 51
| | | | | |
1 FSHKEHYLRL HVNSVLCDDN KRCSACTHPI CLQSFYGCMD CDFILHQNCA GFLRMKWHVL 60
61 HNERLTLVTN ETEVFKCYAC ERWSNGFRYQ QGYKSFDVRC GSISEPFFHP SHPDH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.232 | b.61.2 | Metalloprotease inhibitor |
|
Region A: Residues: [463-563] |
1 11 21 31 41 51
| | | | | |
1 PLYCILPYGK IFCNGCYKFK YGMLVCVEYE CNHLICFNCA TLPPVVKHRV DDHPLSLCYG 60
61 EKASGICWCD ICEAKADPEI WFYTCKDQRA SLHTSCVLGD F
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [564-652] |
1 11 21 31 41 51
| | | | | |
1 SGLMPGSTLK SASNSSEVLL NNIVSRPFCS FLELMPGSTL ESAGKSVEVG LNKSTSRPFC 60
61 ISCKLHCIFP IILKRLGTSD EYFCSILCI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.774 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.726 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.701 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.690 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.644 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.478 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.441 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.433 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.428 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.402 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.305 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.289 | d.52.8 | Description not found. |
| View | Download | 0.282 | d.58.3 | Protease propeptides/inhibitors |
