| Protein: | CRD1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 409 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRD1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
704.0 | [0..1] | [409..1] |
|
|
703.0 | [0..1] | [409..1] |
|
|
700.0 | [0..1] | [409..1] |
|
|
693.0 | [0..1] | [409..1] |
|
|
689.0 | [0..1] | [409..20] |
|
|
662.0 | [0..40] | [409..2] |
|
|
662.0 | [0..2] | [409..5] |
|
|
652.0 | [0..2] | [409..4] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE 60
61 IQESLLTPRF YTTDFEEMEQ LFNTEINKN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [90-337] |
1 11 21 31 41 51
| | | | | |
1 LNEAEFEALL QEFKTDYNQT HFVRNKEFKE AADKLQGPLR QIFVEFLERS CTAEFSGFLL 60
61 YKELGRRLKK TNPVVAEIFS LMSRDEARHA GFLNKGLSDF NLALDLGFLT KARKYTFFKP 120
121 KFIFYATYLS EKIGYWRYIT IYRHLKENPE FQCYPIFKYF ENWCQDENRH GDFFSALMKA 180
181 QPQFLNDWQA KLWSRFFCLS VYVTMYLNDC QRTNFYEGIG LNTKEFDMHV IIETNRTTAR 240
241 IFPAVLDV
|
| Detection Method: | |
| Confidence: | 0.967 |
| Match: | 1nnqA |
| Description: | rubrerythrin from Pyrococcus furiosus Pfu-1210814 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [338-409] |
1 11 21 31 41 51
| | | | | |
1 ENPEFKRKLD RMVVSYEKLL AIGETDDASF IKTLKRIPLV TSLASEILAA YLMPPVESGS 60
61 VDFAEFEPNL VY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.853 | a.4.5 | "Winged helix" DNA-binding domain |
