| Protein: | PUB54_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 308 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB54_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
233.0 | [0..10] | [307..18] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MEDAIYVAVN QDVRESKKTL LWALKNLQVK KIFLLHVHLP FSLTTSSSRL EQSEIDAIQD 60
61 SELNTSVNSL YKYRDICINK GVNEKDVDTS MISGHDVGEG IVELIYQNII TNLVMGAAAD 120
121 PHYSRGMSIT SRKAEYVSQH APHSCKIWFI CKGKLIKQR
|
| Detection Method: |  |
| Confidence: | 9.0 |
| Match: | 2gm3A |
| Description: | No description for 2gm3A was found. |
| Term | Confidence | Notes |
| catalytic activity | 0.298809327772818 | bayes_pls_golite062009 |
|
Region A: Residues: [160-308] |
1 11 21 31 41 51
| | | | | |
1 ERSFYLGNPS DSFSEFSTSA EKPISKGRRR DEEEEPESPK EHPGWILEPE ESPKKGRKET 60
61 IEKSKSNESD EDPRLEDFKC PISMEIMRDP HVAADGFTYE AEEFRKWLRS GGRTSPKTNK 120
121 PLENHNLVPN HTLRIIIKDW LEKNPNYKR
|
| Detection Method: | |
| Confidence: | 13.30103 |
| Match: | 2c2lA |
| Description: | Crystal structure of the CHIP U-box E3 ubiquitin ligase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.02652482814057 | bayes_pls_golite062009 |
