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View Structure Prediction Details

Protein: BZP17_ARATH
Organism: Arabidopsis thaliana
Length: 721 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BZP17_ARATH.

Description E-value Query
Range
Subject
Range
gi|23198400, gi|... - gi|23198400|gb|AAN15727.1| putative TGACG-sequence-specific bZIP DNA-binding protein [Arabidopsis th...
739.0 [0..1] [721..1]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPITKEQP PPPAPDPNST YPPPSDFDSI SIPPLDDHFS DQTPIGELMS DLGFPDGEFE  60
   61 LTFDGMDDLY FPAENESFLI PINTSNQEQF GDFTPESESS GISGDCIVPK DADKTITTSG 120
  121 CINRESPRDS DDRCSGADHN LDLPTPLSSQ GSGNCGSDVS EATNESSPKS RNVAVDQKVK 180
  181 VEEAATTTTS ITKRKKEIDE DLTDESRNSK YRRSGED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [218-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADASAVTGEE DEKKRARLMR NRESAQLSRQ RKKHYVEELE EKVRNMHSTI TDLNGKISYF  60
   61 MAENATLRQQ LGGNGMCPPH LPPPPMGM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 1gtwA
Description: CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [306-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPPMAPMPYP WMPCPPYMVK QQGSQVPLIP IPRLKPQNTL GTSKAKKSES KKSEAKTKKV  60
   61 ASISFLGLLF CLFLFGALAP IVNVNYG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [393-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GISGAFYGNY RSNYITDQIY SQHRDRVLDT SRSGAGTGVS NSNGMHRGRD SDRGARKNIS  60
   61 ATESSVTP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [461-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNGSEPLVAS LFVPRNDKLV KIDGNLIINS ILASEKAVAS RKASESKERK ADLMISKDYT  60
   61 PALPLPDV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [529-721]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRTEELAKHL YRSKAEKQKA LSSGSADTLK DQVKTKAANG EMQQWFREGV AGPMFSSGMC  60
   61 TEVFQFDVSS TSGAIIPAAT NVSAEHGKNT TDTHKQQNRR ILRGLPIPLP GSDFNLTKEH 120
  121 QRNSSSKEIK PASSMVVSVL VDPREGGDGD IDGMIGGPKS LSRVFVVVLL DSAKYVTYSC 180
  181 VLPRSGAPHL VTT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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