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View Structure Prediction Details

Protein: gi|22796166, gi|...
Organism: Arabidopsis thaliana
Length: 697 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22796166, gi|....

Description E-value Query
Range
Subject
Range
gi|5903062, gi|2... - gi|5903062|gb|AAD55621.1|AC008016_31 Is a member of PF|00534 Glycosyl transferases group 1. EST gb|...
579.0 [0..1] [697..1]

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Predicted Domain #1
Region A:
Residues: [1-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDLRLSPLK LGSFKSSLSG RSTPRGSPTL RKVHSGRTPR REGKGSGGAV QWFRSNRLLY  60
   61 WLLLITLWTY LGFYVQSRWA HDDDNKVEFL RFGGKLREDV LHVEQNKRRD LVADESSHAV 120
  121 VDHTNIVHLG VNKRMHVTLA KKEDSTSRRS VSPRRRTRKA SRSSRTRIRS TQKVRKVMET 180
  181 KELDEQDQEL PNINVTYGKL FGPFGSLEDR ILEWSPQKRS GTCDRKSDFK RLVWSRRFVL 240
  241 LFHELSMTGA PISMMELASE LLSCGATVYA VVLSRRGGLL QELTRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [287-697]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RIKVVEDKGE LSFKTAMKAD LVIAGSAVCA SWIDQYMDHH PAGGSQIAWW VMENRREYFD  60
   61 RAKPVLDRVK LLIFLSEVQS KQWLTWCEED HVKLRSQPVI VPLSVNDELA FVAGVSSSLN 120
  121 TPTLTQETMK EKRQKLRESV RTEFGLTDKD MLVMSLSSIN PGKGQLLLLE SVALALEREQ 180
  181 TQEQVAKRNQ SKIIKNLNGI RKEKISLSAR HRLRGSSRKM KITSPAVDNH PSVLSATGRR 240
  241 KLLLSGNVTQ KQDLKLLLGS VGSKSNKVAY VKEMLSFLSN NGNLSNSVLW TPATTRVASL 300
  301 YSAADVYVTN SQGVGETFGR VTIEAMAYGL PVLGTDAGGT KEIVEHNVTG LLHPVGRAGN 360
  361 KVLAQNLLFL LRNPSTRLQL GSQGREIVEK MYMKQHMYKR FVDVLVKCMR P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.0
Match: 2gejA
Description: No description for 2gejA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle