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View Structure Prediction Details

Protein: gi|5668772, gi|1...
Organism: Arabidopsis thaliana
Length: 442 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5668772, gi|1....

Description E-value Query
Range
Subject
Range
gi|75907835, gi|... - gi|75907835|ref|YP_322131.1| non-ribosomal peptide synthase [Anabaena variabilis ATCC 29413], gi|757...
385.0 [0..4] [441..1147]

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Predicted Domain #1
Region A:
Residues: [1-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQELPDCLYE ENQPTLITPL SPTPNHSLYL SNLDDHHFLR FSIKYLYLFQ KSISPLTLKD  60
   61 SLSRVLVDYY PFAGRIRVSD EGSKLEVDCN GEGAVFAEAF MDITCQDFVQ LSPKPNKSWR 120
  121 KLLFKVQAQS FLDIPPLVIQ VTYLRCGGMI LCTAINHCLC DGIGTSQFLH AWAHATTSQA 180
  181 HLPTRPFHSR HVLDPRNPPR VTHSHPGFTR TTTVDKSSTF DISKYLQSQP LAPATLTFNQ 240
  241 SHLLRLKKTC APSLKCTTFE ALAANTWRSW AQSLDLPMTM LVKLLFSVNM RKRLTPELPQ 300
  301 GYYGNGFVLA CAESKVQDLV NGNIYHAVKS IQEAKSRITD EYVRSTIDLL EDKTVKTDVS 360
  361 CSLVISQWAK LGLEELDLGG GKPMYMGPLT SDIYCLFLPV ASDNDAIRVQ MSLPEEVVKR 420
  421 LEYCMVKFLD GKDNEDENSR AC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.045757
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle