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View Structure Prediction Details

Protein: PLP2_ARATH
Organism: Arabidopsis thaliana
Length: 407 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554076 - gi|21554076|gb|AAM63157.1| similar to latex allergen from Hevea brasiliensis [Arabidopsis thaliana]
323.0 [0..3] [407..1]

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Predicted Domain #1
Region A:
Residues: [1-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD  60
   61 VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP KIFPQDHFPF SAAKKLVKSL 120
  121 TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL 180
  181 ADIAISTSAA PTYLPAHFFK VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS 240
  241 DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS 300
  301 DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR 360
  361 VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH AKAPIRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.69897
Match: 1oxwA
Description: Patatin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.28532118625727 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle