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View Structure Prediction Details

Protein: DNAJ8_ARATH
Organism: Arabidopsis thaliana
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNAJ8_ARATH.

Description E-value Query
Range
Subject
Range
DNAJ_MYCPE - Chaperone protein dnaJ OS=Mycoplasma penetrans GN=dnaJ PE=3 SV=1
DNAJ_MYCPE - Chaperone protein DnaJ OS=Mycoplasma penetrans (strain HF-2) GN=dnaJ PE=3 SV=1
153.0 [0..50] [159..1]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL  60
   61 KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN EAYDIVLKQI KNQMEGTEEF 120
  121 EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.0
Match: 1xblA
Description: NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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