| Protein: | APRR9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 468 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APRR9_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
268.0 | [0..39] | [463..6] |
|
Region A: Residues: [1-385] |
1 11 21 31 41 51
| | | | | |
1 MGEIVVLSSD DGMETIKNRV KSSEVVQWEK YLPKTVLRVL LVESDYSTRQ IITALLRKCC 60
61 YKVVAVSDGL AAWEVLKEKS HNIDLILTEL DLPSISGFAL LALVMEHEAC KNIPVIMMSS 120
121 QDSIKMVLKC MLRGAADYLI KPMRKNELKN LWQHVWRRLT LRDDPTAHAQ SLPASQHNLE 180
181 DTDETCEDSR YHSDQGSGAQ AINYNGHNKL MENGKSVDER DEFKETFDVT MDLIGGIDKR 240
241 PDSIYKDKSR DECVGPELGL SLKRSCSVSF ENQDESKHQK LSLSDASAFS RFEESKSAEK 300
301 AVVALEESTS GEPKTPTESH EKLRKVTSDQ GSATTSSNQE NIGSSSVSFR NQVLQSTVTN 360
361 QKQDSPIPVE SNREKAASKE VEAGS
|
| Detection Method: |  |
| Confidence: | 52.30103 |
| Match: | 1ny5A |
| Description: | Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 2.07885074402355 | bayes_pls_golite062009 |
| molecular transducer activity | 2.07885074402355 | bayes_pls_golite062009 |
| two-component response regulator activity | 1.53373140048441 | bayes_pls_golite062009 |
| catalytic activity | 0.470983068319171 | bayes_pls_golite062009 |
| hydrolase activity | 0.0582794297634999 | bayes_pls_golite062009 |
|
Region A: Residues: [386-468] |
1 11 21 31 41 51
| | | | | |
1 QSTNEGIAGQ SSSTEKPKEE ESAKQRWSRS QREAALMKFR LKRKDRCFDK KVRYQSRKKL 60
61 AEQRPRVKGQ FVRTVNSDAS TKS
|
| Detection Method: | |
| Confidence: | 40.39794 |
| Match: | 1ojlA |
| Description: | Crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding |
Matching Structure (courtesy of the PDB): |
|
