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View Structure Prediction Details

Protein: gi|21555779, gi|...
Organism: Arabidopsis thaliana
Length: 159 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21555779, gi|....

Description E-value Query
Range
Subject
Range
gi|49646283 - gi|49646283|emb|CAG82635.1| YALI0B02222p [Yarrowia lipolytica]
gi|50545757, gi|... - gi|50545757|ref|XP_500417.1| YALI0B02222p [Yarrowia lipolytica], gi|49646283|emb|CAG82635.1| unnamed...
125.0 [0..5] [151..12]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTLQKLSS QIHRLSPFTR SLIVRTSATS APSPSLGSKK VSDRIVKLSA IDPDGYKQDI  60
   61 IGLSGQTLLR ALTHTGLIDP ASHRLDDIEA CSAECEVQIA EEWLEKLPPR TYDEEYVLKR 120
  121 SSRSRILNKH SRLGCQVVLT QELQGMVVAV PEAKPWDIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 1rfkA
Description: Crystal Structure of 2Fe2S Ferredoxin from Thermophilic Cyanobacterium Mastigocladus Laminosus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle