| Protein: | NCED6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 577 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCED6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
697.0 | [0..2] | [576..38] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MQHSLRSDLL PTKTSPRSHL LPQPKNANIS RRILINPFKI PTLPDLTSPV PSPVKLKPTY 60
61 PNLNLLQKLA ATMLDKIESS IVIPMEQNRP LP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [93-577] |
1 11 21 31 41 51
| | | | | |
1 KPTDPAVQLS GNFAPVNECP VQNGLEVVGQ IPSCLKGVYI RNGANPMFPP LAGHHLFDGD 60
61 GMIHAVSIGF DNQVSYSCRY TKTNRLVQET ALGRSVFPKP IGELHGHSGL ARLALFTARA 120
121 GIGLVDGTRG MGVANAGVVF FNGRLLAMSE DDLPYQVKID GQGDLETIGR FGFDDQIDSS 180
181 VIAHPKVDAT TGDLHTLSYN VLKKPHLRYL KFNTCGKKTR DVEITLPEPT MIHDFAITEN 240
241 FVVIPDQQMV FKLSEMIRGG SPVIYVKEKM ARFGVLSKQD LTGSDINWVD VPDCFCFHLW 300
301 NAWEERTEEG DPVIVVIGSC MSPPDTIFSE SGEPTRVELS EIRLNMRTKE SNRKVIVTGV 360
361 NLEAGHINRS YVGRKSQFVY IAIADPWPKC SGIAKVDIQN GTVSEFNYGP SRFGGEPCFV 420
421 PEGEGEEDKG YVMGFVRDEE KDESEFVVVD ATDMKQVAAV RLPERVPYGF HGTFVSENQL 480
481 KEQVF
|
| Detection Method: | |
| Confidence: | 121.0 |
| Match: | 2biwA |
| Description: | Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme |
Matching Structure (courtesy of the PDB): |
|
