| Protein: | PARG1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 548 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PARG1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
714.0 | [0..1] | [548..1] |
|
|
501.0 | [0..31] | [544..538] |
|
|
501.0 | [0..31] | [544..537] |
|
|
494.0 | [0..31] | [544..634] |
|
|
490.0 | [0..31] | [544..537] |
|
|
487.0 | [0..31] | [544..537] |
|
|
487.0 | [0..31] | [545..530] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MENREDLNSI LPYLPLVIRS SSLYWPPRVV EALKAMSEGP SHSQVDSGEV LRQAIFDMRR 60
61 SLSFSTLEPS ASNGYAFLFD ELIDEKESKR WFDEIIPALA SLLLQFPSLL EVHFQNADNI 120
121 VSGIKTGLRL LNSQQAGIVF LSQELIGALL ACSFFCLFPD DNRGAKHLPV I
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [172-302] |
1 11 21 31 41 51
| | | | | |
1 NFDHLFASLY ISYSQSQESK IRCIMHYFER FCSCVPIGIV SFERKITAAP DADFWSKSDV 60
61 SLCAFKVHSF GLIEDQPDNA LEVDFANKYL GGGSLSRGCV QEEIRFMINP ELIAGMLFLP 120
121 RMDDNEAIEI V
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.573 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.527 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.503 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.472 | N/A | N/A | d.365.1 | Description not found. |
| View | Download | 0.429 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.424 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.378 | N/A | N/A | d.62.1 | Pepsin inhibitor-3 |
| View | Download | 0.377 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.338 | N/A | N/A | d.52.2 | GMP synthetase C-terminal dimerisation domain |
|
Region A: Residues: [303-440] |
1 11 21 31 41 51
| | | | | |
1 GAERFSCYTG YASSFRFAGE YIDKKAMDPF KRRRTRIVAI DALCTPKMRH FKDICLLREI 60
61 NKALCGFLNC SKAWEHQNIF MDEGDNEIQL VRNGRDSGLL RTETTASHRT PLNDVEMNRE 120
121 KPANNLIRDF YVEGVDNE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.468 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.431 | N/A | N/A | d.91.1 | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
| View | Download | 0.431 | N/A | N/A | d.91.1 | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
| View | Download | 0.411 | N/A | N/A | d.79.1 | YjgF-like |
| View | Download | 0.396 | N/A | N/A | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.395 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.372 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.339 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.304 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.302 | N/A | N/A | d.52.2 | GMP synthetase C-terminal dimerisation domain |
|
Region A: Residues: [441-548] |
1 11 21 31 41 51
| | | | | |
1 DHEDDGVATG NWGCGVFGGD PELKATIQWL AASQTRRPFI SYYTFGVEAL RNLDQVTKWI 60
61 LSHKWTVGDL WNMMLEYSAQ RLYKQTSVGF FSWLLPSLAT TNKAIQPP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.708 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.708 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.694 | N/A | N/A | a.29.14 | Description not found. |
| View | Download | 0.690 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.667 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.667 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.648 | N/A | N/A | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.627 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.627 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.614 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
