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View Structure Prediction Details

Protein: SERA3_ARATH
Organism: Arabidopsis thaliana
Length: 588 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SERA3_ARATH.

Description E-value Query
Range
Subject
Range
SERA_METJA - D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1
SERA_METJA - D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / ...
530.0 [0..47] [588..2]

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Predicted Domain #1
Region A:
Residues: [1-588]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSLNLSSI FSSSSRLVTT PSSVFPIRQR RRIILVTSSS SGGGGKPTIL VTEKLGQAGI  60
   61 DLLKKYANVD CSYDLSLEEL CTKISLCDAL IVRSGTKVGR DVFESSRGRL KVVGRAGVGI 120
  121 DNVDLAAATE YGCLVVNAPT ANTVAAAEHG IALLTAMARN IAQADASIKA GKWTRNKYVG 180
  181 VSLVGKTLAV LGFGKVGSEV ARRARGLGMH VITHDPYAPA DRARAIGVEL VSFEVAISTA 240
  241 DFISLHLPLT AATSKMMNDV TFAMMKKGVR IVNVARGGVI DEEALLRALD SGIVAQAALD 300
  301 VFTVEPPVKD NKLVLHESVT ATPHLGASTM EAQEGVSIEV AEAVIGALRG ELAATAVNAP 360
  361 MVPLEVLREL KPYVVLAEKL GRLAVQLVTG GSGVNAVKVT YASSRAPDDL DTRLLRAMVI 420
  421 KGIIEPISSV FINLVNSDYI AKQRGVKISE ERMVLDGSPE NPIEYITVRI ANVESRFASA 480
  481 LSESGEIKVE GRVKQGVPSL TKVGLFGVDV SLEGSVILCR QVDQPGMIGK VASILGDENV 540
  541 NVSFMSVGRI APGKQAVMAI GVDEQPSKET LKKIGDIPAI EEFVFLKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 116.0
Match: 1ygyA
Description: Crystal Structure of D-3-Phosphoglycerate dehydrogenase From Mycobacterium tuberculosis
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle