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View Structure Prediction Details

Protein: STAD2_ARATH
Organism: Arabidopsis thaliana
Length: 411 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STAD2_ARATH.

Description E-value Query
Range
Subject
Range
gi|951427 - gi|951427|gb|AAA74692.1| stearoyl-acyl-carrier protein desaturase
633.0 [0..10] [411..16]

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Predicted Domain #1
Region A:
Residues: [1-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF  60
   61 RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV EASWQPQDFL PETNDEDRFY 120
  121 EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR 180
  181 AWTAEENRHG DLLNKYLYLS GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER 240
  241 ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS 300
  301 MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL 360
  361 SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS FSWIYGREVE L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 172.0
Match: 1oq4A
Description: delta 9-stearoyl-acyl carrier protein desaturase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle