YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GDL5_ARATH
Organism: Arabidopsis thaliana
Length: 345 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL5_ARATH.

Description E-value Query
Range
Subject
Range
gi|42565424 - gi|42565424|ref|NP_189941.2| carboxylic ester hydrolase/ hydrolase, acting on ester bonds / lipase [...
349.0 [0..6] [345..1]

Back

Predicted Domain #1
Region A:
Residues: [1-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFSLLSTML MALSSVCLFF VGYAQQFSGS VAVSALFAFG DSILDTGNNN NLNTLSKCNF  60
   61 FPYGRNFIGG KATGRFGNGR VFSDMIAEGL NVKKLLPAYR DPNLSKNDLP TGVCFASGGS 120
  121 GLDERTARSQ GVIWVPDQVK DFKEYIMKLN GVVRDKRKVN AIISNAVYLI SAGNNDLAIT 180
  181 YPTLMAQYTV STYTDLLVTW TDNLLKSLYA MGARKFAVLG TLPLGCLPGA RHTGGNFGNI 240
  241 CLVPINQVAA IFNQKLSAKL NNLHTILPGA KFVYVDMYNP LLNLINNPRA SGFIDVADGC 300
  301 CCMPTSPVPC PDASQYVFWD FAHPSEKSYM TIAPKIIEGI KKNLA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.43
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.555413709926701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle