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View Structure Prediction Details

Protein: gi|2352084, gi|1...
Organism: Arabidopsis thaliana
Length: 836 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|2352084, gi|1....

Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHNSPKSRR SRKPEPKPDI YSTFVVHSDS DSDQGRDRDK RKAKPEEDEN VDLYATMVYK  60
   61 GDSDGEGEED DDDDSMLPPL LKRLPKDFGG GASL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYDDDDGDES GDFGTMIVKT DRSSHSKKNS PYSSKPRMGV SPRRRARGGD EESSDEEDEE  60
   61 EDDDDDDGDY GTFVVKSKDK KGKKKDKEID MTTMGRAVAS MQKSNFGGKT RKLDPSSSSS 120
  121 KLHGEDNRKM QQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.522879
Match: 1g83A
Description: Fyn proto-oncogene tyrosine kinase, SH3 domain; Tyrosine kinase Fyn
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [227-567]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNSKMSTTSL PDSITREDPT TKYEFLNELG KGSYGSVYKA RDLKTSEIVA VKVISLTEGE  60
   61 EGYEEIRGEI EMLQQCNHPN VVRYLGSYQG EDYLWIVMEY CGGGSVADLM NVTEEALEEY 120
  121 QIAYICREAL KGLAYLHSIY KVHRDIKGGN ILLTEQGEVK LGDFGVAAQL TRTMSKRNTF 180
  181 IGTPHWMAPE VIQENRYDGK VDVWALGVSA IEMAEGLPPR SSVHPMRVLF MISIEPAPML 240
  241 EDKEKWSLVF HDFVAKCLTK EPRLRPTAAE MLKHKFVERC KTGASAMSPK IEKSRQIRAT 300
  301 MALQAQSVVA PSLEDTSTLG PKSSEELGIT VPSKPPQNST E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.09691
Match: 3comA
Description: No description for 3comA was found.

Predicted Domain #4
Region A:
Residues: [568-674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APLTSTLNRQ HITGNTVLAG EGGDFGTMIV HGEDETEESD SRSQLVREKE SSSSQFEGVP  60
   61 REFPGEELPD SWIHDKKKPP AIDLPVEASI SQSMQASSSH EHRTKLH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [675-733]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NIAGTQMEGG SDASGSTLKN ETVGRKAFAL QDKLWSIYAA GNTVPIPFLR ATDISPIAL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [734-836]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSENMIGGMQ QDGNGTVAVE ALQELFTSSD PQSKKGRRGQ NEMPLPPSVY QRLTTSSSLM  60
   61 NLAQVLAYHR ACYEEMPLQE LQATQEQQTI QNLCDTLRTI LRL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle