| Protein: | AUX1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 485 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AUX1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
216.0 | [0..3] | [480..6] |
|
Region A: Residues: [1-404] |
1 11 21 31 41 51
| | | | | |
1 MSEGVEAIVA NDNGTDQVNG NRTGKDNEEH DGSTGSNLSN FLWHGGSVWD AWFSCASNQV 60
61 AQVLLTLPYS FSQLGMLSGI VLQIFYGLLG SWTAYLISVL YVEYRARKEK EGKSFKNHVI 120
121 QWFEVLDGLL GSYWKALGLA FNCTFLLFGS VIQLIACASN IYYINDHLDK RTWTYIFGAC 180
181 CATTVFIPSF HNYRIWSFLG LGMTTYTAWY LAIASIIHGQ AEGVKHSGPT KLVLYFTGAT 240
241 NILYTFGGHA VTVEIMHAMW KPQKFKYIYL MATLYVFTLT IPSAAAVYWA FGDALLDHSN 300
301 AFSLMPKNAW RDAAVILMLI HQFITFGFAC TPLYFVWEKV IGMHDTKSIC LRALARLPVV 360
361 IPIWFLAIIF PFFGPINSAV GALLVSFTVY IIPSLAHMLT YRSA
|
| Detection Method: |  |
| Confidence: | 1.58 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [405-485] |
1 11 21 31 41 51
| | | | | |
1 SARQNAAEKP PFFMPSWTAM YVLNAFVVVW VLIVGFGFGG WASVTNFVRQ VDTFGLFAKC 60
61 YQCKPAAAAA HAPVSALHHR L
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
