| Protein: | TR164_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 261 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TR164_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
182.0 | [0..1] | [253..13] |
|
|
181.0 | [0..1] | [253..13] |
|
|
177.0 | [0..3] | [240..15] |
|
|
177.0 | [0..13] | [257..35] |
|
|
174.0 | [0..13] | [255..31] |
|
|
174.0 | [0..18] | [252..28] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MARLVFSLNL PSSHGFNLSP RNLQSFFVTQ TGAPRFRAVR CKPNPESSET KQEKLVIDNG 60
61 ETSSASKEVE SSSSVADSSS SSSSGFPESP NKDINRRVAA VTVIAALSLF VSTRLDFG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.487 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.430 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.430 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.428 | a.243.1 | Description not found. |
| View | Download | 0.420 | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.369 | a.24.19 | Description not found. |
| View | Download | 0.366 | c.55.3 | Ribonuclease H-like |
| View | Download | 0.365 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.346 | a.41.1 | Domain of poly(ADP-ribose) polymerase |
| View | Download | 0.341 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.216 | a.36.1 | Signal peptide-binding domain |
|
Region A: Residues: [119-261] |
1 11 21 31 41 51
| | | | | |
1 ISLKDLTASA LPYEEALSNG KPTVVEFYAD WCEVCRELAP DVYKIEQQYK DKVNFVMLNV 60
61 DNTKWEQELD EFGVEGIPHF AFLDREGNEE GNVVGRLPRQ YLVENVNALA AGKQSIPYAR 120
121 AVGQYSSSES RKVHQVTDPL SHG
|
| Detection Method: | |
| Confidence: | 28.09691 |
| Match: | 1quwA |
| Description: | Thioredoxin |
Matching Structure (courtesy of the PDB): |
|
