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View Structure Prediction Details

Protein: RSZ22_ARATH
Organism: Arabidopsis thaliana
Length: 200 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSZ22_ARATH.

Description E-value Query
Range
Subject
Range
PABP_CANAL - Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1
PABP_CANAL - Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans (strain SC5314 / ATCC MYA...
gi|238879187 - gi|238879187|gb|EEQ42825.1| polyadenylate-binding protein [Candida albicans WO-1]
142.0 [0..3] [196..337]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRVYVGNLD PRVTERELED EFRAFGVVRS VWVARRPPGY AFLDFEDPRD ARDAIRALDG  60
   61 KNGWRVEQSH NRGERGGG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.154902
Match: 2i2yA
Description: No description for 2i2yA was found.

Predicted Domain #2
Region A:
Residues: [79-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRGGDRGGGG GGRGGRGGSD LKCYECGETG HFARECRNRG GTGRRRSKSR SRTPPRYRRS  60
   61 PSYGRRSYSP RARSPPPPRR RSPSPPPARG RSYSRSPPPY RAREEVPYAN GNGLKERRRS 120
  121 RS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.78
Match: 2cqfA
Description: Solution Structure of the Zinc-finger domain in LIN-28
Matching Structure (courtesy of the PDB):

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