| Protein: | gi|928969, gi|15... |
| Organism: | Arabidopsis thaliana |
| Length: | 269 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|928969, gi|15....
| Description | E-value | Query Range |
Subject Range |
|
|
247.0 | [0..1] | [269..1] |
|
|
245.0 | [0..1] | [265..1] |
|
|
244.0 | [0..1] | [269..1] |
|
|
238.0 | [0..1] | [269..1] |
|
|
236.0 | [0..1] | [269..1] |
|
|
236.0 | [0..1] | [269..1] |
|
|
233.0 | [0..1] | [269..1] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MGRSPCCEKE HMNKGAWTKE EDERLVSYIK SHGEGCWRSL PRAAGLLRCG KSCRLRWINY 60
61 LRPDLKRGNF THDEDELIIK LHSLLGNKWS LIAARLPGRT DNEIKNYWNT HIKRKLLSKG 120
121
|
| Detection Method: |  |
| Confidence: | 33.69897 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [121-214] |
1 11 21 31 41 51
| | | | | |
1 IDPATHRGIN EAKISDLKKT KDQIVKDVSF VTKFEETDKS GDQKQNKYIR NGLVCKEERV 60
61 VVEEKIGPDL NLELRISPPW QNQREISTCT ASRF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.307 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.296 | d.79.2 | Tubulin/Dihydroxyacetone kinase C-terminal domain |
| View | Download | 0.289 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.289 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.234 | a.8.4 | Description not found. |
| View | Download | 0.203 | d.14.1 | Ribosomal protein S5 domain 2-like |
|
Region A: Residues: [215-269] |
1 11 21 31 41 51
| | | | | |
1 YMENDMECSS ETVKCQTENS SSISYSSIDI SSSNVGYDFL GLKTRILDFR SLEMK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.836 | N/A | N/A | d.17.1 | Cystatin/monellin |
| View | Download | 0.804 | N/A | N/A | d.9.2 | Description not found. |
| View | Download | 0.804 | N/A | N/A | b.34.13 | Chromo domain-like |
| View | Download | 0.797 | N/A | N/A | d.17.1 | Cystatin/monellin |
| View | Download | 0.774 | N/A | N/A | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.751 | N/A | N/A | d.17.1 | Cystatin/monellin |
| View | Download | 0.686 | N/A | N/A | b.34.9 | Tudor/PWWP/MBT |
| View | Download | 0.667 | N/A | N/A | b.34.3 | Myosin S1 fragment, N-terminal domain |
| View | Download | 0.457 | N/A | N/A | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.383 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.378 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.323 | N/A | N/A | g.3.11 | EGF/Laminin |
| View | Download | 0.320 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
