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View Structure Prediction Details

Protein: gi|15233659, gi|...
Organism: Arabidopsis thaliana
Length: 496 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15233659, gi|....

Description E-value Query
Range
Subject
Range
gi|92869618 - gi|92869618|gb|ABE79240.1| Type I phosphodiesterase/nucleotide pyrophosphatase [Medicago truncatula]
268.0 [0..10] [494..1]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISGDTLSAK KPKSVPQEED QDPPSQSIAL LDNHTDSSGS DSSTRSISSC FIFTSLLLVT  60
   61 CIALSAASAF AFLFFSSQKP VLSLN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QISKSPAFDR SVARPLKKLD KPVVLLISSD GFRFGYQFKT KLPSIHRLIA NGTEAETGLI  60
   61 PVFPTLTFPN HYSIVTGLYP AYHGIINNHF VDPETGNVFT MASHEPEWWL GEPLWETVVN 120
  121 QGLKAATYFW PGSEVHKGSW NCPQGLCQNY NGSVPFDDRV DTILSYFDLP SNEIPSFMTL 180
  181 YFEDPDHQGH QVGPDDPQIT EAVVNIDRLI GRLIDGLEKR GIFEDVTMIM VGDHGMVGTC 240
  241 DKKLVVLDDL APWIKIPSSW VQYYTPLLAI QPPSGHDAAD IVAKINEGLS SGKVENGKYL 300
  301 KVYLKEDLPS RLHYVDSDRI PPIIGLVDEG FKVEQKKSKA KECGGAHGYD NAFFSMRTIF 360
  361 IGHGPMFSKG RKVPSFENVQ IYNVISSILG LKAAPNNGSD EFSSSILLPR V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.522879
Match: 2gsnA
Description: No description for 2gsnA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle