| Protein: | gi|7671452, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 566 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7671452, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
457.0 | [0..1] | [566..1] |
|
|
372.0 | [0..1] | [566..15] |
|
|
290.0 | [0..63] | [535..101] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MEMLRSSDQS QFVSYDASSA ASSSPYLLDN FYGWSNQKPQ EFFKEEAQLA AAASMADSTI 60
61 LTTFVDPQSH HSQNHIPKLE DFLGDSSSIV RYSDNSQTDT QDSSLTQIYD PRHHHNQTGF 120
121 YSDHHDFKTM AGFQSAFSTN SGSEVDDSAS IGRTHLAGDY LGHVVESSGP ELGFHGGSTG 180
181 ALSLGVNVNN NTNHRNDNDN HYRGNNNGER INNNNNND
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [219-330] |
1 11 21 31 41 51
| | | | | |
1 NEKTDSEKEK AVVAVETSDC SNKKIADTFG QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE 60
61 GQARKGRQGG YDKEDKAARA YDLAALKYWN ATATTNFPIT NYSKEVEEMK HM
|
| Detection Method: | |
| Confidence: | 4.4 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [331-447] |
1 11 21 31 41 51
| | | | | |
1 TKQEFIASLR RKSSGFSRGA SIYRGVTRHH QQGRWQARIG RVAGNKDLYL GTFATEEEAA 60
61 EAYDIAAIKF RGINAVTNFE MNRYDVEAIM KSALPIGGAA KRLKLSLEAA ASSEQKP
|
| Detection Method: | |
| Confidence: | 23.30103 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [448-566] |
1 11 21 31 41 51
| | | | | |
1 ILGHHQLHHF QQQQQQQQLQ LQSSPNHSSI NFALCPNSAV QSQQIIPCGI PFEAAALYHH 60
61 HQQQQQHQQQ QQQQNFFQHF PANAASDSTG SNNNSNVQGT MGLMAPNPAE FFLWPNQSY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.339 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.331 | a.74.1 | Cyclin-like |
| View | Download | 0.331 | a.74.1 | Cyclin-like |
| View | Download | 0.328 | a.24.3 | Cytochromes |
| View | Download | 0.328 | a.24.3 | Cytochromes |
| View | Download | 0.317 | a.7.8 | GAT domain |
| View | Download | 0.317 | a.7.8 | GAT domain |
| View | Download | 0.309 | a.7.12 | Description not found. |
| View | Download | 0.297 | a.24.3 | Cytochromes |
| View | Download | 0.281 | a.7.1 | Spectrin repeat |
