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View Structure Prediction Details

Protein: gi|9294332, gi|1...
Organism: Arabidopsis thaliana
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9294332, gi|1....

Description E-value Query
Range
Subject
Range
gi|7268286, gi|1... - pir||D71418 hypothetical protein - Arabidopsis thaliana, gi|7268286|emb|CAB78581.1| HSR201 like pro...
328.0 [0..1] [443..1]

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Predicted Domain #1
Region A:
Residues: [1-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METMKVETIA KEIIKPSSTT PNDLQTLQLS IYDHILPPVY TVAFLFYTKD DLISPEQSSH  60
   61 KLKTSLAETL TKFYPLAGRI KGVTIDCNDE GAVFVDARVN NYPLSDFLRS PDFKTLQQLL 120
  121 PLDVIDDPYE AATTWPLLLV KATYFPCGGM AIGLCITHKI ADATSISTFI QSWAAMARGE 180
  181 AGDIVADPVF AAANFYPPAN ELFKFPVDEN ANKISQITKR FVFSASKLEE LRTKAASEDF 240
  241 VGRPKRVESV TALLWKAFVA AASSNTNACD MKVLIQPSNL RPKIPSLLAE SLIGNIMFSS 300
  301 VVLGISQQEE IKIEKAVRDL RKQGDDLQNV IKEEGGSSSA MIGSKLANLM LTNYSKLSYE 360
  361 THEPYTVSSW CKLPLYEASF GWGSPVWIAG NVAPMLENVT MLIDSKDGQG IEAFVTLPEE 420
  421 NMLSLEQNTE LLAFASVNPS VLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.045757
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle