| Protein: | MA653_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 707 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MA653_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
266.0 | [0..1] | [616..2178] |
|
|
220.0 | [0..1] | [637..1175] |
|
|
220.0 | [0..1] | [566..1182] |
|
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220.0 | [0..1] | [637..65] |
|
|
219.0 | [0..1] | [617..1127] |
|
|
219.0 | [0..1] | [566..1178] |
|
Region A: Residues: [1-317] |
1 11 21 31 41 51
| | | | | |
1 MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN 60
61 RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS LKQELGRILP ELEEMQKRKV 120
121 ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR 180
181 VETIRKHLCT LYSHCSVLGM DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV 240
241 KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV 300
301 EAEVVRLDEV KASKMKE
|
| Detection Method: |  |
| Confidence: | 16.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [318-449] |
1 11 21 31 41 51
| | | | | |
1 LVLKKRSELE EICRKTHLLP VSDSAIDQTI VAIESGIVDA TMVLEHLEQH ISKIKEEALS 60
61 RKEILERVEK WLSACDEESW LEEYNRDDNR YNAGRGAHLT LKRAEKARNL VTKLPGMVEA 120
121 LASKTIVWEQ EN
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [450-521] |
1 11 21 31 41 51
| | | | | |
1 GIEFLYDGIR LLSMLEEYNI LRQEREEEHR RQRDQKKLQG QLIAEQEALY GSKPSPSKPL 60
61 GGKKAPRMST GG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.810 | a.16.1 | S15/NS1 RNA-binding domain |
|
Region A: Residues: [522-707] |
1 11 21 31 41 51
| | | | | |
1 ASNRRLSLGA AMHQTPKPNK KADHRHNDGA LSNGRRGLDI AGLPSRKQSM NPSEMLQSPL 60
61 VRKPFSPIST TVVASKANIA TTTTQQLPKN NAVNEISSFA TPIKNNNILR NLEEEKMMTM 120
121 MMQTPKNVAA MIPIPSTPAT VSVPMHTAPT PFTNNARLMS EKPEVVEYSF EERRLAFMLQ 180
181 SECRLV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
