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View Structure Prediction Details

Protein: gi|9759366, gi|7...
Organism: Arabidopsis thaliana
Length: 900 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9759366, gi|7....

Description E-value Query
Range
Subject
Range
gi|70878483 - gi|70878483|gb|EAN91735.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71649745 - gi|71649745|ref|XP_813586.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
364.0 [0..13] [899..753]
TGH_ARATH - G patch domain-containing protein TGH OS=Arabidopsis thaliana GN=TGH PE=2 SV=1
203.0 [0..1] [900..1]
CE04485 - WBGene00018024 status:Partially_confirmed TR:Q20007 protein_id:AAB52641.1
187.0 [0..16] [899..228]
gi|157763916 - gi|157763916|ref|XP_001674301.1| Hypothetical protein CBG18881 [Caenorhabditis briggsae AF16]
gi|187024180, gi... - gi|39594262|emb|CAE71840.1| Hypothetical protein CBG18881 [Caenorhabditis briggsae], gi|187024180|em...
187.0 [0..14] [899..44]
gi|114187791, gi... - gi|115385595|ref|XP_001209344.1| predicted protein [Aspergillus terreus NIH2624], gi|114187791|gb|EA...
180.0 [0..14] [900..105]
gi|118777847, gi... - gi|118777847|ref|XP_308312.3| ENSANGP00000024414 [Anopheles gambiae str. PEST], gi|116132098|gb|EAA4...
178.0 [0..14] [900..455]

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Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSDEEDFVF HGTPIEREEE IASRKKKAVA GASGNLRTLP AWKQEVTDEE GRRRFHGAFT  60
   61 GGYSAGYYNT VGSKEGWAPQ SFTSSRQNRA GARKQSISDF LDEDEKADME GKSLSASSQF 120
  121 DTFGFTAAEH SRKHAEKEQH ERPSAIPGPV PDELVAPVSE SIGVKLLLKM GWRRGHSIKE 180
  181 VRASSDARRE ARKAFLAFYT 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 52.657577
Match: PF07713.5
Description: No description for PF07713.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [201-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DENTKETPDS LVSETEVETS LGEDIKISES TPVYVLNPKQ DLHGLGYDPF KHAPEFRGK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [260-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IAPGFGIGAL EELDVEDEDV YAGYDFDQTY VIEDEQPARQ SNDNRLRLTS KE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [312-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HDVLPGFGAA KNSDYSMERF NPPIIPKDFV ARHKFSGPLE AETKPTVSAP PEVPPPADNN  60
   61 LKLLIEGFAT FVSRCGKLYE DLSREKNQSN QLFDFLREGN GHDYYARRLW EEQQKRKDQS 120
  121 KLTLDVKVSP TVQKMTAETR GSLLGEKPLQ RSLKETDTSA SSGGSFQFPT NLSDTFTKSA 180
  181 SSQEAADAVK PFKDDPAKQE RFEQFLKEKY KGGLRTTDSN R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [533-654]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNSMSESARA QERLDFEAAA EAIEKGKAYK EVRRATEQPL DFLAGGLQFT SGGTEQIKDT  60
   61 GVVDMKSSKT YPKREEFQWR PSPLLCKRFD LPDPFMGKLP PAPRARNKMD SLVFLPDTVK 120
  121 AA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [655-804]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SARQVSESQV PKKETSIEEP EVEVEVENVE RPVDLYKAIF SDDSEDDEDQ PMNGKIQEGQ  60
   61 EKKNEAAATT LNRLIAGDFL ESLGKELGFE VPMEEEIKSR SKPEDSSDKR LDRPGLKEKV 120
  121 EEKTSSLTLG SEEEKSRKKR EKSPGKRSGG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [805-900]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDLSSSESSG DERRRKRYNK KDRHRNDSES DSSSDYHSRD KQGSRSRSKR RESSREKRSS  60
   61 HKKHSKHRRT KKSSSSRYSS DEEQKESRRE KKRRRD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle