| Protein: | ATL12_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 390 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL12_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
173.0 | [0..7] | [390..2] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MNSPQEISIL FFFIIFLDYV SAQSPPPPNL YATSDLFKPS LAIITGVFSI VFTLTFVLLV 60
61 YAKCFHNDLR SETDSDGERI RHDRLWQGLF NRSSRFSGLD KKAIESLPFF RFS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [114-187] |
1 11 21 31 41 51
| | | | | |
1 ALKGLKQGLE CSVCLSKFED VEILRLLPKC RHAFHIGCID QWLEQHATCP LCRNRVNIED 60
61 DLSVLGNSST SLRI
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [188-390] |
1 11 21 31 41 51
| | | | | |
1 LNQSETREED SRLEIYIERE EGTNDGSSRF SSFRKILKKS LLLEREGNEN IDEKKLMHKF 60
61 NHRIVVSDAV FKNRWSNITS SDLTFLTSEM LNSVSSDRFS SVDRVHRGNL RDKEDMEMKR 120
121 MLIKHKDSSR RTVSEITTVS REKAVGGSYR GSTASTSQNY AVTATTEERR RRLWLPIARR 180
181 TAQWFVNREK SNDLNTTRQN LNV
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 1z5zA |
| Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
