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View Structure Prediction Details

Protein: NAP5_ARATH
Organism: Arabidopsis thaliana
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAP5_ARATH.

Description E-value Query
Range
Subject
Range
gi|18253111 - gi|18253111|dbj|BAB83959.1| multidrug resistance p-glycoprotein [Canis lupus familiaris]
277.0 [0..1] [323..246]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRERYDKVI EACSLSKDLE ILSFGDQTVI GERGINLSGG QKQRIHIARA LYQDADIYLF  60
   61 DDPFSAVDAH TGSHLFKEAL RGLLCSKSVI YVTHQVEFLP SADLTLVMKD GRISQAGKYN 120
  121 DILISGTDFR ELIGAHQESL AVVGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 2cbzA
Description: No description for 2cbzA was found.

Predicted Domain #2
Region A:
Residues: [146-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADASSVSENS ALDEENGVVR DDIGFDGKQE SQDLKNDKLD SGEPQRQFVQ EEERAKGSVA  60
   61 LDVYWKYITL AYGGALVPFI LLGQILFQLL QIGSNYWMAW ATPISEDVQA PVKLSTLMVV 120
  121 YVALAFGSSL CILVRATLLV TAGYKTATEL FHKMHHCIFR SPMSFKIAKT CSKTCIYSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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