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View Structure Prediction Details

Protein: CP122_ARATH
Organism: Arabidopsis thaliana
Length: 131 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CP122_ARATH.

Description E-value Query
Range
Subject
Range
gi|21555170 - gi|21555170|gb|AAM63795.1| CP12 protein precursor-like protein [Arabidopsis thaliana]
201.0 [0..1] [131..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIATGLNI ATQRVFVTSE NRPVCLAGPV HLNNSWNLGS RTTNRMMKLQ PIKAAPEGGI  60
   61 SDVVEKSIKE AQETCAGD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.701 N/A N/A b.34.1 C-terminal domain of transcriptional repressors
View Download 0.608 N/A N/A g.15.1 Ovomucoid/PCI-1 like inhibitors
View Download 0.600 N/A N/A d.9.2 Description not found.
View Download 0.591 N/A N/A b.34.5 Translation proteins SH3-like domain
View Download 0.460 N/A N/A b.34.3 Myosin S1 fragment, N-terminal domain

Predicted Domain #2
Region A:
Residues: [79-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVSGECVAAW DEVEELSAAA SHARDKKKAD GSDPLEEYCK DNPETNECRT YDN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.522879
Match: 2pkqO
Description: No description for 2pkqO was found.

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