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View Structure Prediction Details

Protein: GDL72_ARATH
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL72_ARATH.

Description E-value Query
Range
Subject
Range
gi|42572117, gi|... - gi|42572117|ref|NP_974149.1| family II extracellular lipase 1 (EXL1) [Arabidopsis thaliana], gi|2882...
326.0 [0..2] [352..17]
gi|92887597 - gi|92887597|gb|ABE88960.1| Lipolytic enzyme, G-D-S-L [Medicago truncatula]
321.0 [0..24] [352..39]
gi|115478062, gi... - gi|115478062|ref|NP_001062626.1| Os09g0132200 [Oryza sativa (japonica cultivar-group)], gi|113630859...
321.0 [0..7] [352..6]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMFITMSMC LSVIACFYAG VGTGETLVPA LIIMGDSVVD AGNNNHRITL VKANFPPYGR  60
   61 DFVAHSATGR FSNGKLATDF TAENLGFTSY PVAYL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQEANETNLL TGANFASGAS GFDDATAIFY NAITLSQQLK NYKEYQNKVT NIVGKERANE  60
   61 IFSGAIHLLS TGSSDFLQSY YINPILNRIF TPDQYSDHLL RSYSTFVQNL YGL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [209-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GARRIGVTTL PPLGCLPAAI TLFGGVGNNM CVERLNQDAV SFNTKLNNTS INLTNNLPGL  60
   61 KLVVFDIYNP LLNMVINPVE YGFFESRRAC CGTGTMETSF LCNALSVGTC SNATNYVFWD 120
  121 GFHPSEAANR VIANNLLVQG IPLIS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle