YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PFKA1_ARATH
Organism: Arabidopsis thaliana
Length: 473 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PFKA1_ARATH.

Description E-value Query
Range
Subject
Range
gi|22136018 - gi|22136018|gb|AAM91591.1| pyrophosphate-dependent phosphofructo-1-kinase-like protein [Arabidopsis ...
497.0 [0..1] [473..1]

Back

Predicted Domain #1
Region A:
Residues: [1-473]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSVPNSDR KIVTGPAGYI LEDVPHFSDD FPDHPTYPNP LQDNAAYSVV KQYFVDEDDT  60
   61 VPQKIVVHPD SPRGTHFRRA GPRQRVYFES DDVLACIVTC GGLCPGLNTV IREIVCGLSY 120
  121 MYGVKRILGI DGGYRGFYAR NTIHLDLKTV NDIHRSGGTI LGTSRGGHNT TKIVDSIQDR 180
  181 GINQVYIIGG DGSQKGAAAI FEEIRKRKLK VAVAGIPKTI DNDIPIIDRS FGFDTAVEEA 240
  241 QRAINAAHVE ATSFENGIGL VKLMGRYSGF IAMHATLASR DVDCCLIPES PFFLEGSGGL 300
  301 FEFIDKRLKE SGHMVIVIAE GAGQDLLSES MKESTTLKDA SGNKLLQDIG LWISQRIKDH 360
  361 FAKKMTLTLK YIDPTYMIRA VPSNASDNVC CTLLAQSAVH GVMAGYNGFT VGLVNGRHTY 420
  421 IPFNRITEKQ NKVVITDRMW ARLLSSTNQP SFMKQADKIH SNQLVGEPGT MKW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.39794
Match: 2higA
Description: No description for 2higA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle