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View Structure Prediction Details

Protein: MDAR1_ARATH
Organism: Arabidopsis thaliana
Length: 434 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MDAR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|71062053, gi|... - gi|71082940|ref|YP_265659.1| dihydrolipoyl dehydrogenase [Candidatus Pelagibacter ubique HTCC1062], ...
301.0 [0..1] [433..1]

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Predicted Domain #1
Region A:
Residues: [1-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKSFKYII LGGGVSAGYA AKEFANQGVQ PGELAVISKE AVAPYERPAL SKGYLFPEGA  60
   61 ARLPGFHCCV GSGGEKLLPE SYKQKGIELI LSTEIVKADL SAKSLVSATG DVFKYQTLII 120
  121 ATGSTVLRLT DFGVKGADSK NILYLREIDD ADKLVEAIKA KKGGKAVVVG GGYIGLELSA 180
  181 VLRINNLDVT MVFPEPWCMP RLFTADIAAF YETYYTNKGV KIIKGTVASG FTAQPNGEVK 240
  241 EVQLKDGRTL EADIVIVGVG AKPLTSLFKG QVEEDKGGIK TDAFFKTSVP DVYAVGDVAT 300
  301 FPLKMYGDVR RVEHVDHSRK SAEQAVKAIK AAEGGAAVEE YDYLPFFYSR SFDLSWQFYG 360
  361 DNVGDSVLFG DSNPSNPKPR FGAYWVQGGK VVGAFMEGGS GDENKALAKV AKARPSAESL 420
  421 DELVKQGISF AAKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.69897
Match: 1q1rA
Description: Crystal Structure of Putidaredoxin Reductase from Pseudomonas putida
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.72883626464817 bayes_pls_golite062009
oxidoreductase activity 1.82811823516707 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.528358134873026 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 0.513206464007948 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 0.181113997070302 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle