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View Structure Prediction Details

Protein: gi|6714411, gi|6...
Organism: Arabidopsis thaliana
Length: 274 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6714411, gi|6....

Description E-value Query
Range
Subject
Range
gi|15237955, gi|... - gi|9755762|emb|CAC01734.1| putative protein [Arabidopsis thaliana], gi|15237955|ref|NP_197241.1| uni...
196.0 [0..1] [274..1]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSLKKSVK LSLRHVRIRS STIGFKPDSS SIEIDQRIEF LGEEETDGDS TSEYEEFEEE  60
   61 KERGGEGEGE EQDDGCKIVE SGYKSEHEET EAAVEAVEAE ITE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [104-274]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGNRVMVVVD KVIASTGALE WALKHTLQSQ DYLFLLYFSK PFRKGKRKNR KSEVKTDELV  60
   61 HTLKKLCQTK RPGIEVEIRR LQGKEKEKGE KIVEEAKEQQ VSLLVVGKEK KPPVWRLLKR 120
  121 WGWKKRRGRA GTLKYCLEKA SCMTIAVKPK NRKLGGYLIT TKRHKNFWLL A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.69897
Match: 2pfsA
Description: No description for 2pfsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle