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View Structure Prediction Details

Protein: OPR1_ARATH
Organism: Arabidopsis thaliana
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OPR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|5701740 - gi|5701740|dbj|BAA83083.1| LEDI-5a protein [Lithospermum erythrorhizon]
421.0 [0..1] [371..1]

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Predicted Domain #1
Region A:
Residues: [1-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENGEAKQSV PLLTPYKMGR FNLSHRVVLA PLTRQRSYGN VPQPHAAIYY SQRTTPGGFL  60
   61 ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVDAVHAKG GIFFCQIWHV GRVSNSGFQP 120
  121 NGKAPISCSD KPLMPQIRSN GIDEALFTPP RRLGIEEIPG IVNDFRLAAR NAMEAGFDGV 180
  181 EIHGANGYLI DQFMKDTVND RTDEYGGSLQ NRCKFPLEIV DAVAKEIGPD RVGIRLSPFA 240
  241 DYMESGDTNP GALGLYMAES LNKYGILYCH VIEARMKTMG EVHACPHTLM PMRKAFKGTF 300
  301 ISAGGFTRED GNEAVSKGRT DLVAYGRWFL ANPDLPKRFQ VDAPLNKYDR PTFYTSDPVV 360
  361 GYTDYPFLES TA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 115.0
Match: 1vjiA
Description: Gene Product of At1g76680 from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity 3.50791144647902 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 2.11027907327307 bayes_pls_golite062009
catalytic activity 1.94749091175302 bayes_pls_golite062009
coenzyme binding 0.99234662301893 bayes_pls_golite062009
binding 0.724672865863266 bayes_pls_golite062009
nucleic acid binding 0.350068675013616 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.0276497014195508 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle