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View Structure Prediction Details

Protein: DOX2_ARATH
Organism: Arabidopsis thaliana
Length: 631 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOX2_ARATH.

Description E-value Query
Range
Subject
Range
gi|12539609 - gi|12539609|gb|AAG59584.1|AF229926_1 pathogen-inducible alpha-dioxygenase [Nicotiana attenuata]
586.0 [0..3] [631..13]

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Predicted Domain #1
Region A:
Residues: [1-631]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFSPSSSWF LHPQLHHVVS KMSYFDAFLF YIVHLVDKLG LWHRFPVLLG VAYLGLRRHL  60
   61 HQRYNLVHVG PINGQGYDTD EFCYRTADGK CNHPSDNTIG SQGSFIGRNM PPSTSQYGIL 120
  121 DPHPSVVATK LLARKRFIDN GDQFNVIACS WIQFMIHDWV DHLEDTHQIE LEAPEEVASG 180
  181 CPLKSFKFLR TKKVPTDDHH KSGAVNTRTP WWDGSVIYGN DETGMRRVRV FKDGKLKISG 240
  241 DGLLERDERG VPISGDIRNS WSGFSLLQAL FVKEHNSVCD MLKERYPDFD DEKLYRTARL 300
  301 VTAAVIAKVH TIDWTIELLK TDTLTAGMRI NWYGFFGKKV KDMVGARFGP LFSGLVGLKK 360
  361 PNDHGVPYSL TEEFVSVYRM HCLLPETLIL RDMNSENVDK ENPAIEREIP MTELIGKKAG 420
  421 EKASKLGFEQ LLVSMGHQSC GALTLWNYPN WMRNLVAQDI DGEDRPHLID MAALEIYRDR 480
  481 ERGVPRYNEF RKNLLMSPIS KWEELTDDEE AIKVLREVYE DDIEKLDLNV GLHAEKKIKG 540
  541 FAISETAFFI FLLVASRRLE ADRFFTTNFN EKTYTKEGLE WVNTTETLKD VIDRHFPRLT 600
  601 DQWMRCSSAF SVWGSDPNPK NWVPLYLRSA P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 115.0
Match: 1pxxA
Description: CRYSTAL STRUCTURE OF DICLOFENAC BOUND TO THE CYCLOOXYGENASE ACTIVE SITE OF COX-2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle