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View Structure Prediction Details

Protein: gi|51970710, gi|...
Organism: Arabidopsis thaliana
Length: 144 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51970710, gi|....

Description E-value Query
Range
Subject
Range
gi|4337001 - gi|4337001|gb|AAD18030.1| Tsi1-interacting protein TSIP1 [Nicotiana tabacum]
236.0 [0..2] [143..5]
gi|115479241, gi... - gi|50725898|dbj|BAD33426.1| putative Tsi1-interacting protein TSIP1 [Oryza sativa Japonica Group], g...
165.0 [0..45] [142..51]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTICMCCDSH LVAKSILNPW NSPRITKLGF VPVVRRFPAT TTVKASAVDS PESSSNFAKR  60
   61 MDQAWIISQQ PSPVGCSSCN SKGHVECKWC AGTGFFILGD NMLCQVPSRN TSCVICSGQG 120
  121 SASCSDCKGT GFRAKWLEKP PVPT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.71
Match: 2cttA
Description: Solution structure of zinc finger domain from human DnaJ subfamily A menber 3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle