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View Structure Prediction Details

Protein: SCL13_ARATH
Organism: Arabidopsis thaliana
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCL13_ARATH.

Description E-value Query
Range
Subject
Range
gi|23397333 - gi|23397333|gb|AAK59436.2| putative scarecrow protein [Arabidopsis thaliana]
418.0 [0..1] [286..246]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVSGSPIQ RLGTYMAEGL RARLEGSGSN IYKSLKCNEP TGRELMSYMS VLYEICPYWK  60
   61 FAYTTANVEI LEAI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGETRVHIID FQIAQGSQYM FLIQELAKHP GGPPLLRVTG VDDSQSTYAR GGGLSLVGER  60
   61 LATLAQSCGV PFEFHDAIMS GCKVQREHLG LEPGFAVVVN FPYVLHHMPD ESVSVENHRD 120
  121 RLLHLIKSLS PKLVTLVEQE SNTNTSPFLS RFVETLDYYT AMFESIDAAR PRDDKQRISA 180
  181 EQHCVARDIV NMIACEESER VERHEVLGNG GSE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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