| Protein: | gi|15222136, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 178 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222136, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
183.0 | [0..1] | [170..183] |
|
|
177.0 | [0..1] | [170..345] |
|
|
177.0 | [0..1] | [170..345] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MKLKTEPLSN EKNFSKVKKA LSSIPQVRDQ KFEEETNTVT IKVVCCSPEK VMDKLCSKGR 60
61 GAIKLIETI
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1w9rA |
| Description: | Solution Structure of Choline Binding Protein A, Domain R2, the Major Adhesin of Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [70-178] |
1 11 21 31 41 51
| | | | | |
1 DPAKHVAQKP KEPEKPKEAE KPKEPEKPKP AAAPAQGDPS SQRVTHGYNP PPMMGHPVPW 60
61 SDGPNYGWSR PNGYDERPIY NSYGGWQPPP SQYGGRSHYE EEQPSCSIM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.306 | d.66.1 | Alpha-L RNA-binding motif |
| View | Download | 0.306 | d.66.1 | Alpha-L RNA-binding motif |
| View | Download | 0.210 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.204 | a.60.16 | Description not found. |
