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View Structure Prediction Details

Protein: gi|15240871, gi|...
Organism: Arabidopsis thaliana
Length: 456 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240871, gi|....

Description E-value Query
Range
Subject
Range
gi|75907835, gi|... - gi|75907835|ref|YP_322131.1| non-ribosomal peptide synthase [Anabaena variabilis ATCC 29413], gi|757...
364.0 [0..2] [455..1127]

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Predicted Domain #1
Region A:
Residues: [1-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTSSEVKI VSQCFVKPKT IPEKWKEPYH LSPLDLVMLS MHYLQNGLLF LKSDDATKTK  60
   61 DFMETWLQKL RDSLAETLVH FYPLAGRLST LKTDNPRSYS VFVDCNDSPG AGFIHAKSDL 120
  121 SVRDIVGSNY VPLVVQSFFD HHKAVSHDGH TMSLFSVKVT ELVDGVFIGF SLNHAVGDGG 180
  181 SLWHFFNSLS EIFNAQETDN LLLKNPPVLS RWFPKGYGPV YNLPFTHSDE FISRFESPVL 240
  241 KERIFHFSSE TITSLKSKAN EESRTTTISS FQALAAFMWR CITRARNLPY DHEIRCSLAA 300
  301 NNGTKLDPPL SLSYLGNCLS AVKSKTVTSG ELLENDLGWA ALKMHEAVIG NTSEVVSETI 360
  361 KNWLKSSYVF HLEKLLGAMV VHIGSSPRFK MYECEFGMGK AVAVRSGYGG KFDGKISAYA 420
  421 GREGGGTIDL EVCLLPEFME ALESDQEFMS VVSSSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.221849
Match: 2e1tA
Description: No description for 2e1tA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle