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View Structure Prediction Details

Protein: gi|15237763, gi|...
Organism: Arabidopsis thaliana
Length: 182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15237763, gi|....

Description E-value Query
Range
Subject
Range
gi|10178283 - gi|10178283|emb|CAC08341.1| lipoic acid synthase-like protein [Arabidopsis thaliana]
266.0 [0..1] [181..294]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQIALSPA IAAAIRRPSS HDCLSASATT ATATPMALKS CIVAPLSLFT SQSQIKHSSS  60
   61 RKTSRTTIRC DVAIKSADSI NADANP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.817 d.17.1 Cystatin/monellin
View Download 0.730 b.55.1 PH domain-like
View Download 0.684 d.17.5 Uracil-DNA glycosylase inhibitor protein
View Download 0.677 d.53.1 Ribosomal protein S3 C-terminal domain
View Download 0.639 d.50.2 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain

Predicted Domain #2
Region A:
Residues: [87-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSPSSEEEI EAEAKAKIGS RVRVTAPLKV YHVNRVPEVD LEGMEGKLKD YVAVWKGKRI  60
   61 SANLPYKIEF FKEIEGRGLV KFVSHLKEDE FEFIDQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 2pu9B
Description: No description for 2pu9B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle